大黄鱼slc5a1基因启动子调控分析
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S917.4

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国家现代农业产业技术体系(CARS-47-G04);国家自然科学基金(32573494);2025年度福建省促进海洋与渔业产业高质量发展专项(FJHYF-L-2025-3)


Regulatory analysis of the slc5a1 gene promoter in the large yellow croaker(Larimichthys crocea
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    摘要:

    为研究大黄鱼(Larimichthys croceaslc5a1基因启动子的转录调控机制,采用生物信息学的方法对大黄鱼及其他物种的slc5a1氨基酸序列进行系统进化树分析。以大黄鱼基因组DNA为模板,通过PCR扩增的方法得到slc5a1基因启动子区域序列,并利用生物信息学软件预测分析该序列核心启动子、调控元件和转录因子等分子结构特征,最后采用双荧光素酶报告基因系统检测启动子区域不同片段的转录活性。生物信息学分析结果显示,slc5a1氨基酸序列在鱼类中具有较高的保守性。大黄鱼slc5a1基因启动子区域预测存在3个潜在的核心启动子以及Sp1、C/EBPα、GATA-1、Oct-1等多种转录因子结合位点。双荧光素酶报告基因系统结果发现,大黄鱼slc5a1基因启动子区域的-2 073~-1 723 bp存在正调控元件,-1 723~-1 404 bp存在正调控元件,-1 404~-743 bp区域和-743~-272 bp区域存在负调控元件,-272~+153 bp区域不存在调控元件。研究表明,大黄鱼slc5a1基因上游-2 073~-1 404 bp为该基因的核心启动子。研究结果为进一步研究大黄鱼slc5a1基因的转录调控机制奠定基础。

    Abstract:

    To investigate the transcriptional regulatory mechanism of the slc5a1 gene promoter in the large yellow croaker (Larimichthys crocea). The study employed bioinformatics methods to perform a phylogenetic tree analysis of the slc5a1 amino acid sequences from large yellow croaker and other species. Using large yellow croaker genomic DNA as a template, the slc5a1 gene promoter region was obtained by PCR amplification. Bioinformatics software was then utilized to predict and analyze the molecular structural features of this sequence, including the core promoter, regulatory elements, and transcription factors. Finally, the transcriptional activity of different fragments of the promoter region was assessed using a dual-luciferase reporter gene system. Bioinformatics analysis results showed that the slc5a1 amino acid sequence is highly conserved in fish species. Prediction of the large yellow croaker slc5a1 gene promoter region identified three potential core promoters, as well as binding sites for several transcription factors, including Sp1, C/EBPα, GATA-1, and Oct-1. The results from the dual-luciferase reporter gene system revealed that the region from -2 073 to -1 723 bp of the large yellow croaker slc5a1 gene promoter contains positive regulatory elements, the region from -1 723 to -1 404 bp contains positive regulatory elements, the region from -1 404 to -743 bp contains negative regulatory elements, the region from -743 to -272 bp contains negative regulatory elements, and the region from -272 to +153 bp contains no regulatory elements. The study indicates that the upstream region from -2 073 to -1 404 bp of the large yellow croaker slc5a1 gene is the core promoter of this gene. The research results lay the foundation for further investigation into the transcriptional regulatory mechanism of the large yellow croaker slc5a1 gene.

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王颖,方铭.大黄鱼slc5a1基因启动子调控分析[J].上海海洋大学学报,2026,35(3):625-635.
WANG Ying, FANG Ming. Regulatory analysis of the slc5a1 gene promoter in the large yellow croaker(Larimichthys crocea)[J]. Journal of Shanghai Ocean University,2026,35(3):625-635.

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  • 收稿日期:2025-04-22
  • 最后修改日期:2025-06-17
  • 录用日期:2025-09-05
  • 在线发布日期: 2026-05-11
  • 出版日期: 2026-03-31
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